.. mocafe documentation master file, created by
   sphinx-quickstart on Tue Dec  7 15:05:45 2021.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to Mocafe's documentation!
====================================
Mocafe is a Python package based on `FEniCS <https://fenicsproject.org/>`_ :cite:`FENICS2015` to develop and simulate
Phase Field mathematical models for cancer.

The purpose of Mocafe is to provide an open source and implementation of Phase Field mathematical
models of cancer development and angiogenesis. You can use Mocafe to:

* reproduce cancer phase field models (also in parallel with MPI);
* understand them better inspecting the code, and changing the parameters;
* integrate these models in yours FEniCS scripts.

In the following, you can find the complete package documentation (under 'API Reference'), including demos and bibliography:

.. toctree::
   :maxdepth: 2

   demo_doc/index
   installation
   autoapi/index
   bib



Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`